| MirGeneDB ID | Pab-Mir-629 |
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| Family name |
MIR-629 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cja-Mir-629
Hsa-Mir-629
Mml-Mir-629
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 73292683-73292743 [-]
UCSC
Ensembl
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| Seed |
GGGUUUA |
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Precursor
(pre-Mir +30nt flank) |
UGCUUCAUGUCCCUUUCCCAGGGGAGGGGCUGGGUUUACAUUGGGAGAACUUUUACCGUGAACCAGGAGGUUCUCCCAACAUAAGCCCAGCCCCUCCCCUCUGCCUGCCUCAACCCUACAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGCUUCAUGUCCCUUUCCC--| CA UUACCGU
AGGGGAGGGGCUGGGUUUA UUGGGAGAACUU \
UCCCCUCCCCGACCCGAAU AACCCUCUUGGA G
CACAUCCCAACUCCGUCCGUC^ AC GGACCAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Pab-Mir-629_5p |
| mirBase accession | None |
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| Sequence |
0- UGGGUUUACAUUGGGAGAACUU -22
Get sequence
|
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| Star sequence |
Pab-Mir-629_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
39- GUUCUCCCAACAUAAGCCCAGC -61
Get sequence
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