| MirGeneDB ID | Pab-Mir-624 |
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| Family name |
MIR-624 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hsa-Mir-624
Mml-Mir-624
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| Node of Origin (locus) |
Catarrhini
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| Node of Origin (family) |
Catarrhini
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 34644118-34644175 [-]
UCSC
Ensembl
|
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| Seed |
AGUACCA |
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Precursor
(pre-Mir +30nt flank) |
UUUUGACCAAUAUAUAAUGCUGUUUCGAGGUAGUACCAGUACCUUGUGUUCAGUGGAACCAAGGUAAACACAAGGUAUUGGUAUUACCUUGAGAUAGCAUUACACCUAAGUGGUUUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUUGACCAAUAUAUAA--| CAGUGGA
UGCUGUUUCGAGGUAGUACCAGUACCUUGUGUU A
ACGAUAGAGUUCCAUUAUGGUUAUGGAACACAA C
ACUUUGGUGAAUCCACAUU^ AUGGAAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-624_5p |
| mirBase accession | None |
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| Sequence |
0- UAGUACCAGUACCUUGUGUUCA -22
Get sequence
|
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| Star sequence |
Pab-Mir-624_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- AACACAAGGUAUUGGUAUUACC -58
Get sequence
|
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