| MirGeneDB ID | Pab-Mir-5687 |
|---|
| Family name |
MIR-5687 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cja-Mir-5687
Hsa-Mir-5687
Mml-Mir-5687
|
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 64614122-64614179 [-]
UCSC
Ensembl
|
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| Seed |
UGACUCU |
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Precursor
(pre-Mir +30nt flank) |
CUCUAGUUGUUCUCUGCUCUCCUCACUUAGCUGACUCUGAAAUCUUCUAAAUGGUACCCACUUUAUUUAGAACAUUUUAGGGUCAAAUAAGUACAGGUUGGAAUCCUGAGUGCACCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCUAGUUGUUCUCUGCUCU- C-| GC C GGUAC
CCU ACUUA UGACUCUGAAAU UUCUAAAU C
GGA UGAAU ACUGGGAUUUUA AAGAUUUA C
CACCACGUGAGUCCUAAGGUU CA^ AA C UUUCA
110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-5687_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- CUGACUCUGAAAUCUUCUAAAU -22
Get sequence
|
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| Co-mature sequence |
Pab-Mir-5687_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- UUAGAACAUUUUAGGGUCAAAU -58
Get sequence
|
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