| MirGeneDB ID | Pab-Mir-2276 |
|---|
| Family name |
MIR-2276 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Hsa-Mir-2276
Mml-Mir-2276
|
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| Node of Origin (locus) |
Catarrhini
|
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054693.2: 26181195-26181254 [+]
UCSC
Ensembl
|
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| Seed |
CCCUCUG |
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Precursor
(pre-Mir +30nt flank) |
UCCCUGGGUUCCUUGUGUUCCUUCCAGUCCGCCCUCUGUCACCUUGCAGACGGCUUUCUCUCCGAGUGUCUGCAAGUGUCAGAGGCGAGGAGUAGCAGCUGCAUCUCUGCAGGGGGACUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCCCUGGGUUCCUUGUG-----------| UCCAGUC C U C GCUUUC
UUCCU CGCC UCUG CAC UUGCAGACG U
GAGGA GCGG AGAC GUG AACGUCUGU C
CUCAGGGGGACGUCUCUACGUCGACGAU^ ------- - U - GAGCCU
. 110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-2276_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- GCCCUCUGUCACCUUGCAGACG -22
Get sequence
|
|---|
| Co-mature sequence |
Pab-Mir-2276_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- UCUGCAAGUGUCAGAGGCGAGG -60
Get sequence
|
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