| MirGeneDB ID | Pab-Mir-1269 |
|---|
| Family name |
MIR-1269 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hsa-Mir-1269
Mml-Mir-1269
|
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| Node of Origin (locus) |
Catarrhini
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| Node of Origin (family) |
Catarrhini
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 50871184-50871247 [-]
UCSC
Ensembl
|
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| Seed |
UGGACUG |
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Precursor
(pre-Mir +30nt flank) |
UACCACUAGAUUGCCUAGAACAGGGAAGCCAGUUGGCGUGGCUCAGUCCAAGUCUGACGACCUGAGGAAUGCCUGGACUGAGCCAUGCUACUGGCUUCCCUGGUCUCCAGCUUGCAGAUGGUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UACCACUAGAUUGCCUA--| A U A CUGACGAC
GA CAGGGAAGCCAGU GGCGUGGCUCAGUCCA GU \
CU GUCCCUUCGGUCA UCGUACCGAGUCAGGU CG C
UCUGGUAGACGUUCGACCU^ G - C UAAGGAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
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| Star sequence |
Pab-Mir-1269_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGUUGGCGUGGCUCAGUCCAAGU -23
Get sequence
|
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| Mature sequence |
Pab-Mir-1269_3p |
| mirBase accession | None |
|---|
| Sequence |
42- CUGGACUGAGCCAUGCUACUGG -64
Get sequence
|
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