MirGeneDB ID | Ovu-Novel-84 |
Family name |
OCT-NOVEL-84 (all species) |
Seed |
GUGCUGU |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Obi-Novel-84
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Node of Origin (locus) |
Octopus
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Node of Origin (family) |
Octopus
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01057751.1: 30213-30268 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CAGUAAAAACAAAAAAUUUAAGUAUGUUAUAGUGCUGUGAGUUGAGGAACUGAAGUAUGAAAUAUUUCUUUUCCUUACGGCACCCUAAUAUACUGUAGUUUUUUUCACUUUUUGCU
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGUAAAAACAAAAAAUUUA--| UA UU CUGAAGU
AGUAUGUUA GUGCUGUGAG GAGGAA A
UCAUAUAAU CACGGCAUUC UUUCUU U
UCGUUUUUCACUUUUUUUGAUG^ CC CU UAUAAAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
Unknown
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Motifs | No |
Tissue expression
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Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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Mature sequence |
Ovu-Novel-84_5p |
mirBase accession | None |
Sequence |
0- AGUGCUGUGAGUUGAGGAACU -21
Get sequence
|
Star sequence |
Ovu-Novel-84_3p* (predicted) |
mirBase accession | None |
Sequence |
35- UUCUUUUCCUUACGGCACCCU -56
Get sequence
|