| MirGeneDB ID | Obi-Novel-84 |
|---|
| Family name |
OCT-NOVEL-84 (all species) |
|---|
| Seed |
GUGCUGU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
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| Paralogues |
|
|---|
| Orthologues |
Ovu-Novel-84
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ425434: 36264-36319 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAGUAAAAACAAAAAAUUUAAGUAUGUUAUAGUGCUGUGAGUUGAGGAACUGAGGUAUGAAAUAUUUCUUUUCCUUACGGCACCCUAAUAUACUGUAGUUUUUUUCACUUUUUGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGUAAAAACAAAAAAUUUA--| UA UU CUGAGGU
AGUAUGUUA GUGCUGUGAG GAGGAA A
UCAUAUAAU CACGGCAUUC UUUCUU U
UCGUUUUUCACUUUUUUUGAUG^ CC CU UAUAAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-84_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGCUGUGAGUUGAGGAACU -21
Get sequence
|
|---|
| Star sequence |
Obi-Novel-84_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- UUCUUUUCCUUACGGCACCCU -56
Get sequence
|
|---|
