| MirGeneDB ID | Ovu-Novel-34 |
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| Family name |
COL-NOVEL-34 (all species) |
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| Seed |
GACGAGC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-34
Obi-Novel-34
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01020471.1: 90973-91034 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGUGAGAUAACAUCUGAGCGUCUGUACGUCCGACGAGCAGGCACGAUAGCGUCUGUAUUUCUGAGACGGCGCGAUAGCGUCUGUACGUCCGACGAGCCGACGUGAUAGCAACAUGCACGAGU
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GGUGAGAUAACAUCUGA--| U A C A ACG A CUGUAUU
GCGUC GU CGUC GACG GCAGGC AU GCGU U
UGCAG CG GCAG CUGC UGUCUG UA CGCG C
UGAGCACGUACAACGAUAG^ C A C A CGA G GCAGAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-34_5p |
| mirBase accession | None |
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| Sequence |
0- CGACGAGCAGGCACGAUAGCGU -22
Get sequence
|
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| Star sequence |
Ovu-Novel-34_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- GCGAUAGCGUCUGUACGUCCGA -62
Get sequence
|
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