| MirGeneDB ID | Ovu-Novel-14 |
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| Family name |
COL-NOVEL-14 (all species) |
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| Seed |
CCACGGU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-14
Obi-Novel-14
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01011047.1: 149053-149115 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAAAAUUGAGAAGAAACAGGCAAUUAGUAACUGGGUUUUCACUGAUGUCACGAACUGUUUCAAAUAUAUGACCACGGUGUAUAAUUCAGUAACUAGUAGCUUGUCUUGCAACUCUAAUAUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGAAAAUUGAGAAGAAA-- A A UU-| AU CGAACUGU
CAGGC AUUAGU ACUGGGUU CACUG GUCA U
GUUCG UGAUCA UGACUUAA GUGGC CAGU U
AUUAUAAUCUCAACGUUCU A A UAU^ AC AUAUAAAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-14_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUGGGUUUUCACUGAUGUCA -21
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-14_3p |
| mirBase accession | None |
|---|
| Sequence |
41- ACCACGGUGUAUAAUUCAGUAA -63
Get sequence
|
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