MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-331

Family name MIR-331 (all species)
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-331
Paralogues
Orthologues Bta-Mir-331  Cfa-Mir-331  Cja-Mir-331  Cpo-Mir-331  Dno-Mir-331  Eca-Mir-331  Ete-Mir-331  Hsa-Mir-331  Laf-Mir-331  Mml-Mir-331  Mmr-Mir-331  Mmu-Mir-331  Pab-Mir-331  Rno-Mir-331 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chr4: 74616379-74616434 [+] UCSC Ensembl
Seed CCCCUGG
Precursor
(pre-Mir +30nt flank)		 
CCAAGGAAUUUGGUUUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACUCGCGCAUCAUUCCCGGAG
Get precursor sequence
Structure
        10          20        30        40        50        
CCAAGGAAUUUGGUUUU--|        U        U    U       AU CCAGAU 
                   GUUUGGGUU GUUCUAGG AUGG CCCAGGG  C      \
                   CAAAUCCAA CAAGAUCC UAUC GGGUCCC  G      C
GAGGCCCUUACUACGCGCU^        C        -    C       CG ACCAAA 
    110       100        90        80         70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
He Ki Te To Wh
Star sequence

Ocu-Mir-331_5p*
mirBase accessionMIMAT0048380
Sequence 
0- CUAGGUAUGGUCCCAGGGAUCC -22
Get sequence
Mature sequence

Ocu-Mir-331_3p
mirBase accessionMIMAT0048381
Sequence 
35- GCCCCUGGGCCUAUCCUAGAA -56
Get sequence