MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-12094

Family name MIR-12094 (all species)
Seed GACUGUU
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-12094
Paralogues
Orthologues
Node of Origin (locus) O. cuniculus
Node of Origin (family) O. cuniculus
Genome context
(oryCun2_add)
chr4: 80950553-80950610 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGAAAGGGAUGAGGUGAGCUCCAGUUCCAGAGCGGAGGUAACAGUACCUCUAGAAAUGAUCCAGAUGACUGUUAGCUCCGAUCAGCACUGAGGCUCCUCUACACUCUACUCCUCUA
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Structure
        10           20        30        40        50         
AAUGAAAGGGAUGAGGU---|   UC    UCCA  G     G       ACC  UAGAAA 
                    GAGC  CAGU    GA CGGAG UAACAGU   UC      \
                    CUCG  GUCA    CU GCCUC AUUGUCA   AG      U
AUCUCCUCAUCUCACAUCUC^   GA    CGA-  A     G       GU-  ACCUAG 
      110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-12094_5p*

mirBase accessionMIMAT0048627
Sequence
0- AGAGCGGAGGUAACAGUACCUC -22
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Mature sequence

Ocu-Mir-12094_3p

mirBase accessionMIMAT0048628
Sequence
37- UGACUGUUAGCUCCGAUCAGC -58
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