MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-12091

Family name MIR-12091 (all species)
Seed GACAGUC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-12091
Paralogues
Orthologues
Node of Origin (locus) O. cuniculus
Node of Origin (family) O. cuniculus
Genome context
(oryCun2_add)
chrX: 44424515-44424575 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUUCUGCUGCCAGAUUGGGCUUGGUGGUCUGACAGUCACUGAUGCCUCCACCCUGUGUUAUGUCAGUGAGUGAGACAAGUGACUGUUUGAUUACUAUGCCUGCUGCUCGCCACUCAGAAG
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Structure
        10          20        30        40           50         
AAUUCUGCUGCCAGAUU--    U        U          GA  C   ---|  CCUGUG 
                   GGGC UGGUGGUC GACAGUCACU  UG CUC   CAC      U
                   UCCG AUCAUUAG UUGUCAGUGA  AC GAG   GUG      U
GAAGACUCACCGCUCGUCG    U        U          --  A   UGA^  ACUGUA 
 .       110       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-12091_5p

mirBase accessionMIMAT0048621
Sequence
0- UGACAGUCACUGAUGCCUCCACCC -24
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Star sequence

Ocu-Mir-12091_3p*

mirBase accessionMIMAT0048622
Sequence
38- GAGUGAGACAAGUGACUGUUUGA -61
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