| MirGeneDB ID | Obi-Novel-77 |
|---|
| Family name |
OCT-NOVEL-77 (all species) |
|---|
| Seed |
GCUCGUC |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Novel-77
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ417281: 274934-274994 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCACUUCACCUCUAUGGCCUAAUGGCUAUGGGCUCGUCCCUACCCUUGCAGUGCAGCAUGAAAAAGAACUGCGAGAGAAGGGAGAAGCUCAUAGCUUUUAGGCCACAAUGCUGAGAGAGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCACUUCACCUCUAUGG--| U CG ACC GCAGCAU
CCUAA GGCUAUGGGCU UCCCU CUUGCAGU \
GGAUU UCGAUACUCGA AGGGA GAGCGUCA G
AGGAGAGAGUCGUAACACC^ U AG AGA AGAAAAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-77_5p |
| mirBase accession | None |
|---|
| Sequence |
0- GGCUCGUCCCUACCCUUGCAGU -22
Get sequence
|
|---|
| Star sequence |
Obi-Novel-77_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UGCGAGAGAAGGGAGAAGCUCA -61
Get sequence
|
|---|
