MirGeneDB ID | Ovu-Novel-77 |
Family name |
OCT-NOVEL-77 (all species) |
Seed |
GCUCGUC |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Obi-Novel-77
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Node of Origin (locus) |
Octopus
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Node of Origin (family) |
Octopus
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01057333.1: 171676-171736 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
GCACUUCACCUCUAUGGCCUAAUGGCUAUGGGCUCGUCCCUACCCUUGCAGUGCAGCAUGAAAAAGAACUGCGAGAGAAGGGAGAAGCUCAUAGCUUUUAGGCCACAAUGCUGAGAGAGGA
Get precursor sequence
|
Structure | 10 20 30 40 50
GCACUUCACCUCUAUGG--| U CG ACC GCAGCAU
CCUAA GGCUAUGGGCU UCCCU CUUGCAGU \
GGAUU UCGAUACUCGA AGGGA GAGCGUCA G
AGGAGAGAGUCGUAACACC^ U AG AGA AGAAAAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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Mature sequence |
Ovu-Novel-77_5p |
mirBase accession | None |
Sequence |
0- GGCUCGUCCCUACCCUUGCAGU -22
Get sequence
|
Star sequence |
Ovu-Novel-77_3p* |
mirBase accession | None |
Sequence |
39- UGCGAGAGAAGGGAGAAGCUCA -61
Get sequence
|