| MirGeneDB ID | Obi-Novel-70 |
|---|
| Family name |
OCT-NOVEL-70 (all species) |
|---|
| Seed |
AAGCAAG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Novel-70
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ416617: 304180-304240 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UACGCUGUACUUGACUGAUGGACUUGCGGAGGCUUCAUUAUUGCUGCUUUGUGUUUGUUGAACGGCCCAAAGCAAGUUUUGAUGGAGUUGCCGCAACCAUUGCCACAGGAAUCCCAUUGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACGCUGUACUUGACUG----| AC AG UU - UGUUUGU
AUGG UUGCGG GCUUCAUUA GCU GCUUUG U
UACC AACGCC UGAGGUAGU UGA CGAAAC G
GAGUUACCCUAAGGACACCGU^ -- GU UU A CCGGCAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-70_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGCUUCAUUAUUGCUGCUUUGU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-70_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- AAAGCAAGUUUUGAUGGAGUUGC -61
Get sequence
|
|---|
