| MirGeneDB ID | Ovu-Novel-70 |
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| Family name |
OCT-NOVEL-70 (all species) |
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| Seed |
AAGCAAG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-70
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01005883.1: 240931-240991 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACGCUGUACUUGACUGAUGGACUUGCGGAGGCUUCAUUAUUGCUGCUUUGUGUUUGUUGAACGGCCCAAAGCAAGUUUUGAUGGAGUUGCCGCAACCAUUGCCACAGGAAUCCCAUUGAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACGCUGUACUUGACUG----| AC AG UU - UGUUUGU
AUGG UUGCGG GCUUCAUUA GCU GCUUUG U
UACC AACGCC UGAGGUAGU UGA CGAAAC G
GAGUUACCCUAAGGACACCGU^ -- GU UU A CCGGCAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-70_5p* |
| mirBase accession | None |
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| Sequence |
0- GGCUUCAUUAUUGCUGCUUUGU -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-70_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AAAGCAAGUUUUGAUGGAGUUGC -61
Get sequence
|
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