| MirGeneDB ID | Obi-Mir-12577 |
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| Family name |
MIR-12577 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12577
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ417620: 1197817-1197885 [+]
Ensembl
|
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| Seed |
GUGUCCC |
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Precursor
(pre-Mir +30nt flank) |
AUCUACAGCCGUUACCGAAUCGCAGAGGAAAGUUGGAUUUGUGGAGGCACAUUUUCAGUCUCACCAAACAACAGUUAUGUGUCCCACGGUUCCAACUCUCAGUUGUCGAUAUUAACUUAAAGCAUCAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUCUACAGCCGUUACCGA- -| AG A U A UUUCAGUCUCA
AUCG CAG GA AGUUGGA UUGUGG GGCACAU C
UAGC GUU CU UCAACCU GGCACC CUGUGUA C
UGACUACGAAAUUCAAUUA U^ GA C U - UUGACAACAAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
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|
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| Star sequence |
Obi-Mir-12577_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGUUGGAUUUGUGGAGGCACAUU -23
Get sequence
|
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| Mature sequence |
Obi-Mir-12577_3p |
| mirBase accession | None |
|---|
| Sequence |
47- UGUGUCCCACGGUUCCAACUCU -69
Get sequence
|
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