MirGeneDB ID | Obi-Mir-12567 |
Family name |
MIR-12567 (all species) |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Ovu-Mir-12567
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (PRJNA270931_OBI) |
KQ416617: 304180-304240 [+]
Ensembl
|
Seed |
AAGCAAG |
Precursor (pre-Mir +30nt flank) |
UACGCUGUACUUGACUGAUGGACUUGCGGAGGCUUCAUUAUUGCUGCUUUGUGUUUGUUGAACGGCCCAAAGCAAGUUUUGAUGGAGUUGCCGCAACCAUUGCCACAGGAAUCCCAUUGAG
Get precursor sequence
|
Structure | 10 20 30 40 50
UACGCUGUACUUGACUG----| AC AG UU - UGUUUGU
AUGG UUGCGG GCUUCAUUA GCU GCUUUG U
UACC AACGCC UGAGGUAGU UGA CGAAAC G
GAGUUACCCUAAGGACACCGU^ -- GU UU A CCGGCAA
. 110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Obi-Mir-12567_5p* (predicted) |
mirBase accession | None |
Sequence |
0- GGCUUCAUUAUUGCUGCUUUGU -22
Get sequence
|
Mature sequence |
Obi-Mir-12567_3p (predicted) |
mirBase accession | None |
Sequence |
38- AAAGCAAGUUUUGAUGGAGUUGC -61
Get sequence
|