MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12567

Family name MIR-12567 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Ovu-Mir-12567 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ416617: 304180-304240 [+] Ensembl
Seed AAGCAAG
Precursor
(pre-Mir +30nt flank)
UACGCUGUACUUGACUGAUGGACUUGCGGAGGCUUCAUUAUUGCUGCUUUGUGUUUGUUGAACGGCCCAAAGCAAGUUUUGAUGGAGUUGCCGCAACCAUUGCCACAGGAAUCCCAUUGAG
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Structure
        10            20        30        40         50         
UACGCUGUACUUGACUG----|   AC      AG         UU   -      UGUUUGU 
                     AUGG  UUGCGG  GCUUCAUUA  GCU GCUUUG       U
                     UACC  AACGCC  UGAGGUAGU  UGA CGAAAC       G
GAGUUACCCUAAGGACACCGU^   --      GU         UU   A      CCGGCAA 
 .       110       100          90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Star sequence

Obi-Mir-12567_5p* (predicted)

mirBase accessionNone
Sequence
0- GGCUUCAUUAUUGCUGCUUUGU -22
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Mature sequence

Obi-Mir-12567_3p (predicted)

mirBase accessionNone
Sequence
38- AAAGCAAGUUUUGAUGGAGUUGC -61
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