| MirGeneDB ID | Obi-Mir-12555 |
|---|
| Family name |
MIR-12555 (all species) |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12555
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ420241: 67364-67421 [+]
Ensembl
|
|---|
| Seed |
AUUUAAG |
|---|
Precursor
(pre-Mir +30nt flank) |
CACUCACAGCUGAGUGUUCCUUCCAGUACUAAUUUAAGGUAUCUGUUUCUGUUUUUGUGGUAAAAUGGAAUUGGUUAACUUAGAGUAGUAACAGAGGAAAAUCUUGGAUUAUUAAUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CACUCACAGCUGAGUGU---| CCAG A GU- UGU UUUG
UCCUU UACUA UUUAAG AUC UUCUGUU U
AGGAG AUGAU AGAUUC UGG AAGGUAA G
AAUAAUUAUUAGGUUCUAAA^ ACA- G AAU UU- AAUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12555_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AAUUUAAGGUAUCUGUUUCUGUU -23
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12555_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- UGGAAUUGGUUAACUUAGAGUAG -58
Get sequence
|
|---|
