| MirGeneDB ID | Obi-Mir-12534 |
|---|
| Family name |
MIR-12534 (all species) |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Mir-12534
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ419433: 161488-161544 [-]
Ensembl
|
|---|
| Seed |
CCGCGAU |
|---|
Precursor
(pre-Mir +30nt flank) |
CCAUCAACACGACGUUAGUGGAGGCUGGUUGCCGAAAACAUUUUGCGCUCUGAUGAUUUUGCCAAGACCGCGAUCUGCUUUCGGUGACUGGUCAUCUGCAACGCACCAACCCAGGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAUCAACACGACGUUA- UG -| UG UG A UU C GAUGAU
G GA GGC GU CCGAAA CA UUGCG UCU \
C CU CUG CA GGCUUU GU AGCGC AGA U
CCGGACCCAACCACGCAA GU A^ GU GU C CU C ACCGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Mir-12534_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCCGAAAACAUUUUGCGCUCU -21
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12534_3p |
| mirBase accession | None |
|---|
| Sequence |
36- ACCGCGAUCUGCUUUCGGUGA -57
Get sequence
|
|---|
