| MirGeneDB ID | Obi-Mir-12527 |
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| Family name |
MIR-12527 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12527
Ovu-Mir-12527
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ417544: 781227-781286 [+]
Ensembl
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| Seed |
GGAACCA |
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Precursor
(pre-Mir +30nt flank) |
UACAAAAUGAGAUGUGUUGCGACAGGGGCACGGAACCAACGCUGACUUACCUGGAGAUUUCUGAGAGGGUAAGUCAAUGCUGGCUUCGCGCCCAUGGAGCCAUAACCUUCAUAGGAAAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACAAAAUGAGAUGUGUU--| GA G A A A C GGAGAU
GC CA GGGC CGGA CCA CG UGACUUACCU U
CG GU CCCG GCUU GGU GU ACUGAAUGGG U
UAAAAGGAUACUUCCAAUAC^ AG A C C C A AGAGUC
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Obi-Mir-12527_5p |
| mirBase accession | None |
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| Sequence |
0- CGGAACCAACGCUGACUUACCU -22
Get sequence
|
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| Star sequence |
Obi-Mir-12527_3p* |
| mirBase accession | None |
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| Sequence |
38- GUAAGUCAAUGCUGGCUUCGCG -60
Get sequence
|
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