MirGeneDB ID | Obi-Mir-12524 |
Family name |
MIR-12524 (all species) |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Esc-Mir-12524
Ovu-Mir-12524
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (PRJNA270931_OBI) |
KQ422919: 914604-914672 [-]
Ensembl
|
Seed |
CAUCCAC |
Precursor (pre-Mir +30nt flank) |
GAUACUUUGGAGUUUUUGUGUGUGGUGCACACAUCCACAUGUUGUUGACUUGCCAAUUUCCCCUUCUCACAGUACCGAGUCAACAACUUGUGGAUGUGUACAAAACAGACUCAUUGCAACAUAUGAAGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAUACUUUGGAGUUUUU--| G GG C U CCAAUUUCCCC
GU UGU UG ACACAUCCACA GUUGUUGACUUG \
CA ACA AC UGUGUAGGUGU CAACAACUGAGC U
UGAAGUAUACAACGUUACU^ G AA A U CAUGACACUCU
120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Obi-Mir-12524_5p |
mirBase accession | None |
Sequence |
0- ACAUCCACAUGUUGUUGACUUG -22
Get sequence
|
Star sequence |
Obi-Mir-12524_3p* |
mirBase accession | None |
Sequence |
47- AGUCAACAACUUGUGGAUGUGU -69
Get sequence
|