| MirGeneDB ID | Obi-Mir-12502 |
|---|
| Family name |
MIR-12502 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Esc-Mir-12502
Npo-Mir-12502
Ovu-Mir-12502
|
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| Node of Origin (locus) |
Cephalopoda
|
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| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ418263: 1045148-1045207 [-]
Ensembl
|
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| Seed |
GUUCCUA |
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Precursor
(pre-Mir +30nt flank) |
AAAUAUUCUGUUACCAUACUUUUCUAUCAUAUUCGGUCCUUUUUGGGACCUCGUUUCAAUCUAACGGAAGUUCCUAGAUGGACUGAGAAUGGUAGCUAAGUUCGACCACCAUAGCACAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUAUUCUGUUACCAU--| UU A U U C GUUUCA
ACUU CUAUCAU UUCGGUCC UUU GGGAC UC A
UGAA GAUGGUA GAGUCAGG AGA CCUUG AG U
UUACACGAUACCACCAGCU^ UC A U U A GCAAUC
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12502_5p* |
| mirBase accession | None |
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| Sequence |
0- AUUCGGUCCUUUUUGGGACCUC -22
Get sequence
|
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| Mature sequence |
Obi-Mir-12502_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AGUUCCUAGAUGGACUGAGAAU -60
Get sequence
|
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