| MirGeneDB ID | Oan-Novel-5 |
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| Family name |
OAN-NOVEL-5 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041728.1: 133875511-133875570 [-]
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| Seed |
GGAGCCG |
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Precursor
(pre-Mir +30nt flank) |
CGCCGCGACCGGACCGUGGCGGACGGGCGACGGAGCCGGGAUUGGAACCUUGGGAGUCGGAGGGACCUGGGUUCCGAUCCCGGCUCGGCCACCCGUCUGCUGUGUUGACCUUGGGGAGAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CGCCGCGACCGGACCGU--| CGACG U GAGUC
GGCGGACGGG GAGCCGGGAUUGGAACCU GG G
UCGUCUGCCC CUCGGCCCUAGCCUUGGG CC G
UAGAGGGGUUCCAGUUGUG^ ACCGG U AGGGA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Mature sequence |
Oan-Novel-5_5p |
| mirBase accession | None |
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| Sequence |
0- CGGAGCCGGGAUUGGAACCUUGG -23
Get sequence
|
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| Star sequence |
Oan-Novel-5_3p* |
| mirBase accession | None |
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| Sequence |
37- UGGGUUCCGAUCCCGGCUCGGCC -60
Get sequence
|
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