| MirGeneDB ID | Oan-Mir-1409 |
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| Family name |
MIR-1409 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1409
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041732.1: 8917730-8917789 [+]
|
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| Seed |
AGCGCAC |
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Precursor
(pre-Mir +30nt flank) |
AUCACUCCACGAGAGCCGGCUUUGGGAGGCAAGGGAACUUCUUCUCGCUGAAUAAGGAAAUGCCGUUUCAGCGCACUCAAGUUCUCAUGCCUCCCUCUGCUCCAGCUCAGGCAGCGAAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUCACUCCACGAGAGCC--| UUU A CUUCU UAAGGA
GGC GGGAGGCA GGGAACUU CGCUGAA A
UCG CCCUCCGU CUCUUGAA GCGACUU A
GAAAGCGACGGACUCGACC^ UCU A CUCAC UGCCGU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Oan-Mir-1409_5p* |
| mirBase accession | MIMAT0007226 |
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| Sequence |
0- AAGGGAACUUCUUCUCGCUGAA -22
Get sequence
|
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| Mature sequence |
Oan-Mir-1409_3p |
| mirBase accession | MIMAT0007227 |
|---|
| Sequence |
38- CAGCGCACUCAAGUUCUCAUGC -60
Get sequence
|
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