| MirGeneDB ID | Oan-Mir-1405 |
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| Family name |
MIR-1405 (all species) |
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| Seed |
GCAGCAA |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1405
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041749.1: 114283155-114283213 [+]
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Precursor
(pre-Mir +30nt flank) |
UCCGCCCCCACUUGACACUGACUUGCUCUUUGGCCAAUGAUUGUGGCUGCACCUGAUUCAUUUUGGUGCAGCAACAGCCAUUGGUCAUAAAGCAAACCAGCCUCCUCACCUAAAACACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCCGCCCCCACUUGACA--| AC CUU AU G UGAUU
CUG UUGCU UGGCCAAUG UGU GCUGCACC \
GAC AACGA ACUGGUUAC ACA CGACGUGG C
CCACAAAAUCCACUCCUCC^ CA AAU CG A UUUUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Oan-Mir-1405_5p* |
| mirBase accession | MIMAT0007212 |
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| Sequence |
0- UGGCCAAUGAUUGUGGCUGCACC -23
Get sequence
|
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| Mature sequence |
Oan-Mir-1405_3p |
| mirBase accession | MIMAT0007213 |
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| Sequence |
36- UGCAGCAACAGCCAUUGGUCAUA -59
Get sequence
|
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