| MirGeneDB ID | Oan-Mir-1380 |
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| Family name |
MIR-1380 (all species) |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1380
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041731.1: 68255444-68255502 [+]
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| Seed |
UUUAGUC |
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Precursor
(pre-Mir +30nt flank) |
UGGCUUUGAUGCAGUGAUCACCACCUUGUCACAUCCCUUCUGUCUGCACCUGUGGGGAAAAUCUUAAGGUUUAGUCAGGUGGGGUGUGACAAGGAAGUCGAAAGAAUCAUUUUCAAAAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGCUUUGAUGCAGUGA- -| CA U U C GUGGGGA
UC AC CCUUGUCACAUCCC UCUG CUG ACCU \
AG UG GGAACAGUGUGGGG GGAC GAU UGGA A
CAAAACUUUUACUAAGAA C^ AA U U U AUUCUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Star sequence |
Oan-Mir-1380_5p* |
| mirBase accession | MIMAT0007116 |
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| Sequence |
0- ACAUCCCUUCUGUCUGCACCU -21
Get sequence
|
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| Mature sequence |
Oan-Mir-1380_3p |
| mirBase accession | MIMAT0007117 |
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| Sequence |
38- GUUUAGUCAGGUGGGGUGUGA -59
Get sequence
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