| MirGeneDB ID | Oan-Mir-1374 |
|---|
| Family name |
MIR-1374 (all species) |
|---|
| Seed |
GUUUCCU |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
oan-mir-1374
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. anatinus
|
|---|
| Node of Origin (family) |
O. anatinus
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041747.1: 2572376-2572440 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAGAGUUGGAGGUGCCUGAGUGGUCAGCCUGUUUCCUGGGGCUUCCCUGUUGCUGCUUCCAGUUUGGGUCACCAUGGGAGUUCCAGGGAUCGUGCUGCCCCCCUGGGUCCUGGUCUUGGGGUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAGAGUUGGAGGUGCCUGAGU---| U C U C U CUGCUUCC
GG CAGC UG UUCCUGGGGCUUCC UG UG \
CC GUCG GC AGGGACCUUGAGGG AC AC A
CGUGGGGUUCUGGUCCUGGGUCCCC^ - U U U C UGGGUUUG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Oan-Mir-1374_5p |
| mirBase accession | MIMAT0007055 |
|---|
| Sequence |
0- UGUUUCCUGGGGCUUCCCUGUUG -23
Get sequence
|
|---|
| Star sequence |
Oan-Mir-1374_3p* |
| mirBase accession | None |
|---|
| Sequence |
42- CCAUGGGAGUUCCAGGGAUCGUG -65
Get sequence
|
|---|
