| MirGeneDB ID | Nve-Mir-2027 |
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| Family name |
MIR-2027 (all species) |
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| Seed |
UGCGAUU |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2027
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
N. vectensis
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| Node of Origin (family) |
N. vectensis
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834173.1: 295192-295244 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGAUCUUUCAAUCCGAGAGCCUUAAGGCUUGCUUGUUGGUAAUUUUGCAUCUGUUGCACAUGCGAUUUUACCAAAAUGCAAUUCUUAUGGUUCAGUGAUCAGGAACCCAAUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAGAUCUUUCAAUCCGA--| U GC UUG UU C GU
GAGCC UAAG UUGC UUGGUAA UUGCAU U \
CUUGG AUUC AACG AACCAUU AGCGUA A U
AUAACCCAAGGACUAGUGA^ U UU UAA UU C CG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Nve-Mir-2027_5p* |
| mirBase accession | MIMAT0009772 |
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| Sequence |
0- UGCUUGUUGGUAAUUUUGCAUCU -23
Get sequence
|
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| Mature sequence |
Nve-Mir-2027_3p |
| mirBase accession | MIMAT0009773 |
|---|
| Sequence |
30- AUGCGAUUUUACCAAAAUGCAAU -53
Get sequence
|
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