MirGeneDB 2.1

MirGeneDB ID

Npo-Novel-7

Family name CEP-NOVEL-7 (all species)
Seed UUGCUAU
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Esc-Novel-7  Obi-Novel-7  Ovu-Novel-7 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_018389105_NPO)
JACATO010002266.1: 27541-27599 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACAGGAAGUAGUUCCCAGGCUGUUCCGGUAUUGCUAUGCGAAUGACUGUUUCACUACCAGCAGCUGACAUUUAUCCGCAUAACAAUACCAGAGCAAGCCCUGUUACCGCCUGUUGAAA
Get precursor sequence
Structure
        10         20         30        40        50         
CACAGGAAGUAGUUCCCA-   -|    C       C      A    C    UCACUAC 
                   GGC UGUUC GGUAUUG UAUGCG AUGA UGUU       \
                   CCG ACGAG CCAUAAC AUACGC UAUU ACAG       C
AAAGUUGUCCGCCAUUGUC   A^    A       A      C    U    UCGACGA 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Npo-Novel-7_5p (predicted)

mirBase accessionNone
Sequence
0- AUUGCUAUGCGAAUGACUGUUU -22
Get sequence
Star sequence

Npo-Novel-7_3p* (predicted)

mirBase accessionNone
Sequence
37- ACAUUUAUCCGCAUAACAAUAC -59
Get sequence