| MirGeneDB ID | Obi-Novel-7 |
|---|
| Family name |
CEP-NOVEL-7 (all species) |
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| Seed |
UUGCUAU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Esc-Novel-7
Npo-Novel-7
Ovu-Novel-7
|
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| Node of Origin (locus) |
Cephalopoda
|
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| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ419514: 492759-492817 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUCUACGACUUUAUGCUAGUAUGUUUGGCAAUUGCUAUGCGAAUGACUGUUUCAUGAAGACGACAUGACAUUUAUUCGAAUAGCAAUAGUGGAGCAUGCACAUAACAUCAGACAACACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCUACGACUUUAUGCUA--| G A G C UCAUGAA
GUAUGUUU GC AUUGCUAU CGAAUGA UGUU \
CGUACGAG UG UAACGAUA GCUUAUU ACAG G
ACACAACAGACUACAAUACA^ G A A U UACAGCA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Drosha cut +1 on both arms |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Obi-Novel-7_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUUGCUAUGCGAAUGACUGUUUCA -24
Get sequence
|
|---|
| Star sequence |
Obi-Novel-7_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACAUUUAUUCGAAUAGCAAUAG -59
Get sequence
|
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