| MirGeneDB ID | Neu-Novel-3-P1a |
|---|---|
| Family name | NEU-NOVEL-3 (all species) |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Novel-3-P1a-v1 Neu-Novel-3-P1b-v1 |
| Orthologues | |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | N. eugenii |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
|
| Variant | Neu-Novel-3-P1a-v2 |
| Seed | CCAGAGG |
| Precursor (pre-Mir +30nt flank) |
CCAGUGUUGUCCCUCUGUGGUUCCAGCUUUCUGGGGAACCAGAGGACCAACACUGAGCGet precursor sequence |
| Structure | 10 20 C--| UC UGG C CAGUGUUG CCUCUG UUCCAG U GUCACAAC GGAGAC GGGGUC U CGA^ CA CAA U 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Neu-Novel-3-P1a-v2_5p* |
| mirBase accession | None |
| Sequence |
0- CCAGUGUUGUCCCUCUGUGGUUC -23
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|
| Mature sequence | Neu-Novel-3-P1a-v2_3p |
| mirBase accession | None |
| Sequence |
37- ACCAGAGGACCAACACUGAGC -58
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|
| Variant | Neu-Novel-3-P1a-v1 |
| Seed | ACCAGAG |
| Precursor (pre-Mir +30nt flank) |
CCAGUGUUGUCCCUCUGUGGUUCCAGCUUUCUGGGGAACCAGAGGACCAACACUGAGCGet precursor sequence |
| Structure | 10 20 C--| UC UGG C CAGUGUUG CCUCUG UUCCAG U GUCACAAC GGAGAC GGGGUC U CGA^ CA CAA U 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Neu-Novel-3-P1a-v1_5p* |
| mirBase accession | None |
| Sequence |
0- CCAGUGUUGUCCCUCUGUGGUUCC -24
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|
| Mature sequence | Neu-Novel-3-P1a-v1_3p |
| mirBase accession | None |
| Sequence |
36- AACCAGAGGACCAACACUGAGC -58
Get sequence
|
