| MirGeneDB ID | Neu-Mir-7288 |
|---|
| Family name |
MIR-7288 (all species) |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-7288
Sha-Mir-7288
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051816.1: 49961253-49961312 [+]
UCSC
Ensembl
|
|---|
| Seed |
GUUGGUA |
|---|
Precursor
(pre-Mir +30nt flank) |
CUGGAGUCACUGGAAUAGCUUGUUCCUGGCUGUUGGUACUGGCUGUGGUGGACCUGGAAUAUUAGAGGGUCACCACGCCCAAUAUCCAGUCAGUUGACAAGUCUUGGCCCUCCUCCCUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUGGAGUCACUGGAAUA- C-| UU C C GA UGGAA
GCUUGUU CUGGCUG GGUA UGG UGUGGUG CC U
UGAACAG GACUGAC CUAU ACC GCACCAC GG A
UCUCCCUCCUCCCGGUUC UU^ -- A C UG AGAUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Neu-Mir-7288_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUGGUACUGGCUGUGGUGGACC -24
Get sequence
|
|---|
| Star sequence |
Neu-Mir-7288_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UCACCACGCCCAAUAUCCAGU -60
Get sequence
|
|---|
