| MirGeneDB ID | Neu-Mir-430-P52 |
|---|---|
| Family name | MIR-430 (all species) |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-430-P1 Neu-Mir-430-P2 Neu-Mir-430-P3 Neu-Mir-430-P51 |
| Orthologues | Mdo-Mir-430-P52 |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
|
| Variant | Neu-Mir-430-P52-v1 |
| Seed | AAGUGCU |
| Precursor (pre-Mir +30nt flank) |
CAUCCUCACCAAGGGCCCUUUCUCAACGUUGACAGGAAAGUGCUUCUGGUGAGGGUGACGet precursor sequence |
| Structure | 10 20 --| AG C CAACG CAUCCUCACCA GGC CUUUCU \ GUGGGAGUGGU UCG GAAAGG U CA^ CU U ACAGU 50 40 30 |
| Deep sequencing | |
| Comment | The precursor sequence is incomplete at the 3' end. The sequence is taken from the 3p mature read. |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Neu-Mir-430-P52-v1_5p* |
| mirBase accession | None |
| Sequence |
0- CAUCCUCACCAAGGGCCCUUUCU -23
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|
| Mature sequence | Neu-Mir-430-P52-v1_3p |
| mirBase accession | None |
| Sequence |
36- AAAGUGCUUCUGGUGAGGGUGAC -59
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|
| Variant | Neu-Mir-430-P52-v2 |
| Seed | AGUGCUU |
| Precursor (pre-Mir +30nt flank) |
CAUCCUCACCAAGGGCCCUUUCUCAACGUUGACAGGAAAGUGCUUCUGGUGAGGGUGACGet precursor sequence |
| Structure | 10 20 --| AG C CAACG CAUCCUCACCA GGC CUUUCU \ GUGGGAGUGGU UCG GAAAGG U CA^ CU U ACAGU 50 40 30 |
| Deep sequencing | |
| Comment | The precursor sequence is incomplete at the 3' end. The sequence is taken from the 3p mature read. |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Neu-Mir-430-P52-v2_5p* |
| mirBase accession | None |
| Sequence |
0- CAUCCUCACCAAGGGCCCUUUC -22
Get sequence
|
| Mature sequence | Neu-Mir-430-P52-v2_3p |
| mirBase accession | None |
| Sequence |
37- AAGUGCUUCUGGUGAGGGUGAC -59
Get sequence
|
