| MirGeneDB ID | Neu-Mir-12471 |
|---|
| Family name |
MIR-12471 (all species) |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Sha-Mir-12471
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051816.1: 39947807-39947864 [-]
UCSC
Ensembl
|
|---|
| Seed |
ACGUGUG |
|---|
Precursor
(pre-Mir +30nt flank) |
ACAAGCACUUUCUCGAUGGUGCAUGUGUAUAUGUGCAUGCAUAUAGGUACAUAUAUGCAUCUAUUUGCACGUGUGUGCAUGCAUAUGUACACGUGUACAUGCAGGAGCUCCCAGGGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAAGCACUUUCUCGAUG--| G A UAUAUG
GUGCAUGUGUAUAUGUGCAUGCAUAUA GU CA C
CAUGUGCACAUGUAUACGUACGUGUGU CA GU A
UCGGGACCCUCGAGGACGUA^ G C UUAUCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Neu-Mir-12471_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUGUGCAUGCAUAUAGGUACA -21
Get sequence
|
|---|
| Mature sequence |
Neu-Mir-12471_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CACGUGUGUGCAUGCAUAUGU -58
Get sequence
|
|---|
