| MirGeneDB ID | Neu-Mir-12470 |
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| Family name |
MIR-12470 (all species) |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-12470
Sha-Mir-12470
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051818.1: 386668003-386668061 [-]
UCSC
Ensembl
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| Seed |
GGCAGCA |
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Precursor
(pre-Mir +30nt flank) |
AAACCCUGGAGGAGACCUUGUGAGGGGCAGUGGCAGCAGGUGAUUGCUGAGGCUGAGGUUACUGUAGGCCCCAGCUCUCACCUCCCACUUUCCCUUACAAAAACACCCCGGACUCUGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAACCCUGGAGGAGACC--| C CAGC UU A GAGGU
UUGUGAGGGG AGUGG AGGUGA GCUG GGCU U
AACAUUCCCU UCACC UCCACU CGAC CCGG A
ACGUCUCAGGCCCCACAAA^ U C--- CU C AUGUC
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-12470_5p |
| mirBase accession | None |
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| Sequence |
0- UGGCAGCAGGUGAUUGCUGAGGCU -24
Get sequence
|
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| Star sequence |
Neu-Mir-12470_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
38- CCCCAGCUCUCACCUCCCACU -59
Get sequence
|
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