| MirGeneDB ID | Mmr-Novel-2 |
|---|
| Family name |
MMR-NOVEL-2 (all species) |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
M. murinus
|
|---|
| Node of Origin (family) |
M. murinus
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007663.1: 4346900-4346965 [+]
UCSC
Ensembl
|
|---|
| Seed |
CAAAACC |
|---|
Precursor
(pre-Mir +30nt flank) |
UUUUUUCUGGAGAUAUAAAGCAUUUGGGAACCAAAACCCAAACCCAGCUGAUAGUGUUAUUAAUACUGUGCUGUCAGCUGGGUUUGGAUUUUGACUCCCAAAUGCUUUAUGAUAUAUCUCCAGGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUUUUCUGGAGAUAUA--| AC C GUGUUAUU
AAGCAUUUGGGA CAAAA CCAAACCCAGCUGAUA A
UUCGUAAACCCU GUUUU GGUUUGGGUCGACUGU A
AAGGACCUCUAUAUAGUAU^ CA A CGUGUCAU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mmr-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CCAAAACCCAAACCCAGCUGAUA -23
Get sequence
|
|---|
| Co-mature sequence |
Mmr-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
43- UCAGCUGGGUUUGGAUUUUGACU -66
Get sequence
|
|---|
