MirGeneDB ID | Mml-Mir-7172 |
Family name |
MIR-7172 (all species) |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-7172
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
M. mulatta
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Node of Origin (family) |
M. mulatta
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Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014353.1: 47045771-47045826 [+]
UCSC
Ensembl
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Seed |
GGCCUCU |
Precursor (pre-Mir +30nt flank) |
CAGGAAAGGCCCACAGACUGCUGCUCCUGGAGGCCUCUCAGGGUUUCUGGAUGUGUGUGUGUUCCAUAAACCCUCAGAGAGUCACCUGGAGACCUGCUAAAAUGCAGGUUCUUGGG
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGGAAAGGCCCACAGACU UG-- U A -| C C UGUGU
GC CUCC GG GGC CUCU AGGGUUU UGGA \
CG GAGG CC CUG GAGA UCCCAAA ACCU G
GGGUUCUUGGACGUAAAAU UCCA U A A^ C U UGUGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | UGUG in loop |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-7172_5p |
mirBase accession | MIMAT0028282 |
Sequence |
0- AGGCCUCUCAGGGUUUCUGGA -21
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-7172-5p
|
Star sequence |
Mml-Mir-7172_3p* |
mirBase accession | MIMAT0028283 |
Sequence |
34- CAUAAACCCUCAGAGAGUCACC -56
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-7172-3p
|