MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-7172

Family name MIR-7172 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-7172
Paralogues
Orthologues
Node of Origin (locus) M. mulatta
Node of Origin (family) M. mulatta
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014353.1: 47045771-47045826 [+] UCSC Ensembl
Seed GGCCUCU
Precursor
(pre-Mir +30nt flank)
CAGGAAAGGCCCACAGACUGCUGCUCCUGGAGGCCUCUCAGGGUUUCUGGAUGUGUGUGUGUUCCAUAAACCCUCAGAGAGUCACCUGGAGACCUGCUAAAAUGCAGGUUCUUGGG
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Structure
        10        20          30         40        50       
CAGGAAAGGCCCACAGACU  UG--    U  A   -|   C       C    UGUGU 
                   GC    CUCC GG GGC CUCU AGGGUUU UGGA     \
                   CG    GAGG CC CUG GAGA UCCCAAA ACCU     G
GGGUUCUUGGACGUAAAAU  UCCA    U  A   A^   C       U    UGUGU 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-7172_5p

mirBase accessionMIMAT0028282
Sequence
0- AGGCCUCUCAGGGUUUCUGGA -21
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Proposed targets TargetScanVert: mml-miR-7172-5p
Star sequence

Mml-Mir-7172_3p*

mirBase accessionMIMAT0028283
Sequence
34- CAUAAACCCUCAGAGAGUCACC -56
Get sequence
Proposed targets TargetScanVert: mml-miR-7172-3p