MirGeneDB ID | Mdo-Mir-7368 |
Family name |
MIR-7368 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7368
|
Paralogues |
|
Orthologues |
Neu-Mir-7368
Sha-Mir-7368
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
X: 26897673-26897733 [-]
UCSC
Ensembl
|
Seed |
GAGUAGG |
Precursor (pre-Mir +30nt flank) |
CUGACUCUUGACUCAGUCUGGAGCUGAGCCUGAGUAGGAGAAGGGCUGUGGAUCUGUAACUGAGGUGGUCACCAGCUCACCUUCUGCCUAGCUCUGCUCCCAGCACCCCACCAAGCUUCGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUGACUCUUGACUCAGU- -| U C A AA UG UGUAA
CU GGAGC GAGC UG GUAGGAG GGGCUG GAUC C
GA CCUCG CUCG AU CGUCUUC CUCGAC CUGG U
AGCUUCGAACCACCCCAC C^ U - C CA CA UGGAG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Mdo-Mir-7368_5p |
mirBase accession | MIMAT0028758 |
Sequence |
0- UGAGUAGGAGAAGGGCUGUGGAUC -24
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7368-5p
|
Star sequence |
Mdo-Mir-7368_3p* |
mirBase accession | MIMAT0028759 |
Sequence |
38- UCACCAGCUCACCUUCUGCCUAG -61
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7368-3p
|