MirGeneDB ID | Mdo-Mir-7358 |
Family name |
MIR-7358 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7358
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
M. domestica
|
Node of Origin (family) |
M. domestica
|
Genome context (monDom5_add) |
Un: 46052360-46052418 [-]
UCSC
Ensembl
|
Seed |
GCGAAAG |
Precursor (pre-Mir +30nt flank) |
CGUCGAGGGAGGCGGGGCUGACCGCGAGGGCGCGAAAGUUGGCAAUGCCUCCGGGAGCCUGGAGUCGGAGGUUUGCCACCUUCCGGACCCUCGUGGCCAGGAAUGUUUCUCAUUACCCU
Get precursor sequence
|
Structure | 10 20 30 40 50
CGUCGAGGGAGGCGGGG--| A CG A U U GGGAGC
CUG CCGCGAGGG CG AAG UGGCAA GCCUCC C
GAC GGUGCUCCC GC UUC ACCGUU UGGAGG U
UCCCAUUACUCUUUGUAAG^ C AG C C - CUGAGG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Mdo-Mir-7358_5p |
mirBase accession | MIMAT0028728 |
Sequence |
0- CGCGAAAGUUGGCAAUGCCUCC -22
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7358-5p
|
Star sequence |
Mdo-Mir-7358_3p* |
mirBase accession | MIMAT0028729 |
Sequence |
38- AGGUUUGCCACCUUCCGGACC -59
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7358-3p
|