MirGeneDB ID | Mdo-Mir-7327 |
Family name |
MIR-7327 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7327
|
Paralogues |
|
Orthologues |
Neu-Mir-7327
Sha-Mir-7327
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
6: 243825029-243825089 [+]
UCSC
Ensembl
|
Seed |
GCGAUUU |
Precursor (pre-Mir +30nt flank) |
CAAGGCUCCAGCUCCUGGUGUGGGACCUUGGGAGGGGUUGAAGACUCGCCCCCUAUCCUGACUCUGAGGGGCGAUUUUACAACCCUUCCCACGAUUCUGCUACCAAACCCAAAGACAAACU
Get precursor sequence
|
Structure | 10 20 30 40 50
CAAGGCUCCAGCUCCUG- -|UG CCU A C CUAUCCU
GU G GGA UGGGAGGGGUUG AGA UCGCCCC \
CA C CUU ACCCUUCCCAAC UUU AGCGGGG G
UCAAACAGAAACCCAAAC U^GU AGC A U AGUCUCA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7327_5p* |
mirBase accession | MIMAT0028656 |
Sequence |
0- GGAGGGGUUGAAGACUCGCCCC -22
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7327-5p
|
Mature sequence |
Mdo-Mir-7327_3p |
mirBase accession | MIMAT0028657 |
Sequence |
39- GGCGAUUUUACAACCCUUCCCA -61
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7327-3p
|