MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-7319

Family name MIR-7319 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7319
Paralogues
Orthologues Neu-Mir-7319  Sha-Mir-7319 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
5: 268329078-268329139 [+] UCSC Ensembl
Seed AAGUUGG
Precursor
(pre-Mir +30nt flank)
CCUCGCUGUGUGACCGUGGGCGGGUCACGCCCCCUCUCUGGGCCUCCUGUUUCCUCAUCUGUAAAAUGGGAAAGUUGGACUAGAGAUGGUGUCUGACCUCCCUCUUAGCCAGGAAGCCUGUG
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Structure
        10           20        30        40        50        60 
CCUCGCUGUGUGACCGU---|  C      C  C  C       G  UC  G    CUCAUCU 
                    GGG GGGUCA GC CC UCUCUGG CC  CU UUUC       \
                    CCC UCCAGU UG GG AGAGAUC GG  GA AAGG       G
GUGUCCGAAGGACCGAUUCU^  -      C  U  U       A  UU  -    GUAAAAU 
120       110       100         90        80         70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7319_5p*

mirBase accessionMIMAT0028638
Sequence
0- CCCCUCUCUGGGCCUCCUGUUUC -23
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Proposed targets TargetScanVert: mdo-miR-7319-5p
Mature sequence

Mdo-Mir-7319_3p

mirBase accessionMIMAT0028639
Sequence
40- AAAGUUGGACUAGAGAUGGUGU -62
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Proposed targets TargetScanVert: mdo-miR-7319-3p