| MirGeneDB ID | Mdo-Mir-7313 |
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| Family name |
MIR-7313 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7313
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
4: 80422358-80422415 [-]
UCSC
Ensembl
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| Seed |
CUGAACA |
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Precursor
(pre-Mir +30nt flank) |
GCACGGCUAAUAUACUUGGGCAGGCAGGGGAAAUCCGUAUACCUUUCAGCUGAGAACAUAAGAACAACUGAACAGGUUUCCGGAUUCCCUGACCUGAUCUGGGAACAGCCACUUCUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCACGGCUAAUAUACUU- - -| AA UAU - C AGAAC
GGG CAGG CAGGGGA UCCG ACCU UUCAG UG A
UCU GUCC GUCCCUU AGGC UGGA AAGUC AC U
GUUCUUCACCGACAAGGG A A^ -- CUU C A AAGAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Mdo-Mir-7313_5p* |
| mirBase accession | MIMAT0028626 |
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| Sequence |
0- AAAUCCGUAUACCUUUCAGCUG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7313-5p
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| Mature sequence |
Mdo-Mir-7313_3p |
| mirBase accession | MIMAT0028627 |
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| Sequence |
36- ACUGAACAGGUUUCCGGAUUCC -58
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7313-3p
|
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