MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7301

Family name MIR-7301 (all species)
Seed UCCUAAU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7301
Paralogues
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
4: 384562205-384562265 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAUCUCUAGGCUCCUUCUGGCUCUCAGACUUCCUAAUCCCCCUGCAUGUUUGAAUAGCUGGAUCUAACCAUGCCAGGGGCGCUGGGAGGUUUGCGAGUUCUUCAUGGCAUCGGCUCCUUU
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Structure
        10          20        30        40         50         
GGAUCUCUAGGCUCCUUCU--     U           AUC     -|    UUUGAAUAG 
                     GGCUC CAGACUUCCUA   CCCCU GCAUG         C
                     UUGAG GUUUGGAGGGU   GGGGA CGUAC         U
UUUCCUCGGCUACGGUACUUC     C           CGC     C^    CAAUCUAGG 
 .       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7301_5p

mirBase accessionMIMAT0029914
Sequence
0- UUCCUAAUCCCCCUGCAUGUUU -22
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Proposed targets TargetScanVert: mdo-miR-7301-5p
Star sequence

Mdo-Mir-7301_3p*

mirBase accessionMIMAT0029915
Sequence
38- CCAUGCCAGGGGCGCUGGGAGGU -61
Get sequence
Proposed targets TargetScanVert: mdo-miR-7301-3p