| MirGeneDB ID | Mdo-Mir-7298 |
|---|
| Family name |
MIR-7298 (all species) |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7298
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
M. domestica
|
|---|
| Node of Origin (family) |
M. domestica
|
|---|
Genome context
(monDom5_add) |
3: 17940149-17940205 [-]
UCSC
Ensembl
|
|---|
| Seed |
CAAGUUA |
|---|
Precursor
(pre-Mir +30nt flank) |
GUGAACUUAAAAAAUGAUCUUACUGUUUUUUCAAGUUAAGCUUCAAGCCAGUGUUUACACUCACCUGGCUUGAAGCUUAACAUGGGAAAAAAAUCAAGAUCACGGCAACUGUUCCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGAACUUAAAAAAUGA- ACUG-| UU A UGUUUA
UCUU UUUU CA GUUAAGCUUCAAGCCAG \
AGAA AAAA GU CAAUUCGAAGUUCGGUC C
ACCCUUGUCAACGGCACU CUAAA^ GG A CACUCA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mdo-Mir-7298_5p |
| mirBase accession | MIMAT0028584 |
|---|
| Sequence |
0- UCAAGUUAAGCUUCAAGCCAGU -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7298-5p
|
|---|
| Star sequence |
Mdo-Mir-7298_3p* |
| mirBase accession | MIMAT0028585 |
|---|
| Sequence |
35- UGGCUUGAAGCUUAACAUGGGA -57
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7298-3p
|
|---|
