| MirGeneDB ID | Mdo-Mir-7289 |
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| Family name |
MIR-7289 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7289
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
3: 484373842-484373900 [-]
UCSC
Ensembl
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| Seed |
GAGCAGC |
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Precursor
(pre-Mir +30nt flank) |
CUCAGAAACAGAUCCCUGCAGGUCUCAAACUGAGCAGCUGGUGGGCUAUGAGCAGAAGUGUCAAACUCACAGCCCACCAGCUGCUUGGUUUGCGGCUGACAUAGCUGCUUUGCCUUCAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUCAGAAACAGAUCCCU--|CA U UG A CAGAAG
G GGUC CAAAC AGCAGCUGGUGGGCU UGAG \
C UCGG GUUUG UCGUCGACCACCCGA ACUC U
UACUUCCGUUUCGUCGAUA^AG C GU C AAACUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Mdo-Mir-7289_5p |
| mirBase accession | MIMAT0028560 |
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| Sequence |
0- UGAGCAGCUGGUGGGCUAUGAG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7289-5p
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| Star sequence |
Mdo-Mir-7289_3p* |
| mirBase accession | MIMAT0028561 |
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| Sequence |
37- CACAGCCCACCAGCUGCUUGGU -59
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7289-3p
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