| MirGeneDB ID | Mdo-Mir-7281 |
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| Family name |
MIR-7281 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7281
|
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| Paralogues |
|
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| Orthologues |
Sha-Mir-7281
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(monDom5_add) |
2: 37484368-37484427 [+]
UCSC
Ensembl
|
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| Seed |
AAUAGGC |
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Precursor
(pre-Mir +30nt flank) |
AGCUCAGCUCUCUGCUUGGUGCCUUGUACAUAAUAGGCUCUUAGUAAAUGUGUGUUAAAUUGAACAACCAUUUAUGAAGUGCCUAUUAUGUACAAGUAACCUUUGAAUCAUGUGGCUGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCUCAGCUCUCUGCUU--| GC U A U UGUUAAA
GGU CUUGUACAUAAUAGGC CUU GUAAAUG G \
CCA GAACAUGUAUUAUCCG GAA UAUUUAC C U
GGGUCGGUGUACUAAGUUU^ AU U G - AACAAGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Mdo-Mir-7281_5p |
| mirBase accession | MIMAT0028536 |
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| Sequence |
0- UAAUAGGCUCUUAGUAAAUGUG -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7281-5p
|
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| Star sequence |
Mdo-Mir-7281_3p* |
| mirBase accession | MIMAT0028537 |
|---|
| Sequence |
38- CAUUUAUGAAGUGCCUAUUAUG -60
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7281-3p
|
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