MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7277

Family name MIR-7277 (all species)
Seed GGGGCAG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7277
Paralogues
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
1: 48274735-48274798 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGGCUUGGCAUCUCCAGGGUCCUCGUCUCUCCUGGUCCUCUCGCUGCCCCCUGCCUGAGCACGUCUGCUGGCGGGGCAGAGAUGACCAGGGGAGGUGCUGGCCCGAGCUCUGCUCCUGGGCCA
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Structure
        10          20        30        40        50         60  
UCGGCUUGGCAUCUCCA--|    CU GU           C    GC      -  GCCUGAGC 
                   GGGUC  C  CUCUCCUGGUC UCUC  UGCCCC CU        \
                   CCCGG  G  GAGGGGACCAG AGAG  ACGGGG GG        A
ACCGGGUCCUCGUCUCGAG^    UC UG           U    --      C  UCGUCUGC 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7277_5p*

mirBase accessionMIMAT0028528
Sequence
0- UCCUGGUCCUCUCGCUGCCCCCUG -24
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Proposed targets TargetScanVert: mdo-miR-7277-5p
Mature sequence

Mdo-Mir-7277_3p

mirBase accessionMIMAT0028529
Sequence
42- CGGGGCAGAGAUGACCAGGGGA -64
Get sequence
Proposed targets TargetScanVert: mdo-miR-7277-3p