| MirGeneDB ID | Mdo-Mir-7275 |
|---|
| Family name |
MIR-7275 (all species) |
|---|
| Seed |
GAAUGUG |
|---|
| Species |
Gray short-tailed opossum (Monodelphis domestica) |
|---|
| MiRBase ID |
mdo-mir-7275
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
M. domestica
|
|---|
| Node of Origin (family) |
M. domestica
|
|---|
Genome context
(monDom5_add) |
2: 233748730-233748789 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACCACCUCUGCCAUGAAGCUACUUUCUUUUCCUUUCACCUCUGAAUAUUCACUAAGUGUUUAUUGAGUGAAUGUGAAUGGGUGAUUGGGAGUGGAAGGAGUGCUUGACUUCUCGAGUGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACCACCUCUGCCAUGAA--| A U U- CUGA AAGUG
GCU CUUUCU UUCCU UCACCU AUAUUCACU U
UGA GGAAGG GAGGG AGUGGG UGUAAGUGA U
AAGUGAGCUCUUCAGUUCG^ - U UU UAAG GUUAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7275_5p* |
| mirBase accession | MIMAT0028524 |
|---|
| Sequence |
0- CCUUUCACCUCUGAAUAUUCACU -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7275-5p
|
|---|
| Mature sequence |
Mdo-Mir-7275_3p |
| mirBase accession | MIMAT0028525 |
|---|
| Sequence |
37- UGAAUGUGAAUGGGUGAUUGGGA -60
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7275-3p
|
|---|
