| MirGeneDB ID | Mdo-Mir-7248 |
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| Family name |
MIR-7248 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7248
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
1: 155944997-155945054 [+]
UCSC
Ensembl
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| Seed |
AUAGAGC |
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Precursor
(pre-Mir +30nt flank) |
CAAGAUAACCACAACCUGAACAUAGGCGUGCAUAGAGCGUGGACUGGGUGUGCUGGCACACCCAGGCACAACCGGACCACACUCUGCAUGCCUGUGCUCCUAAGCUUGACCAGCGCAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAGAUAACCACAACCU--| A UA C A G UGGCA
GA CAUAGGCGUGCA GAG GUGG CUGG UGUGC C
CU GUGUCCGUACGU CUC CACC GGCC ACACG A
GACGCGACCAGUUCGAAUC^ C -- A A A GACCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
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| Mature sequence |
Mdo-Mir-7248_5p |
| mirBase accession | MIMAT0028462 |
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| Sequence |
0- CAUAGAGCGUGGACUGGGUGUGC -23
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7248-5p
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| Star sequence |
Mdo-Mir-7248_3p* |
| mirBase accession | MIMAT0028463 |
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| Sequence |
37- ACAACCGGACCACACUCUGCA -58
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7248-3p
|
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